PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505433.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 237aa    MW: 26122.8 Da    PI: 8.6998
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.6e-1180127454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    +  K +Ka+iL  Av+ + +L
  XP_004505433.1  80 SKACREKLRRDRLNDKFIELGSILEPG---RPAKTDKAAILIDAVRMVTQL 127
                     5678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.84E-1376146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.98976127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.11E-779132No hitNo description
PfamPF000101.5E-880127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.6E-1380150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-982133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MVSRENTNWL FDYGLIDDIP VPDPTFAVPS STLLTWPTHP FNISSNVGAE IDGSLGDSDS  60
LKESGSKKRV RSESCAATSS KACREKLRRD RLNDKFIELG SILEPGRPAK TDKAAILIDA  120
VRMVTQLRGE AQKLKDSNTG LQEKIKELKA EKNELRDEKQ RLKAEKEKLE QQLKSMNAQP  180
SFLPTPTALP AAFAAQGQAH GNKLVPFISY PGVAMWQFMP PAAVDTSQDH VLRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0515690.0BT051569.1 Medicago truncatula clone MTYF5_F6_F7_F81G-O-15 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505433.11e-176PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-116ILR3_ARATH; Transcription factor ILR3
TrEMBLB7FHK41e-159B7FHK4_MEDTR; BHLH domain class transcription factor
STRINGGLYMA06G41620.11e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-93bHLH family protein